Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CYP27A1 ENSSSCG00000016199

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Description

cytochrome P450 family 27 subfamily A member 1 [Source:NCBI gene (formerly Entrezgene);Acc:100126282]

Location

Primary_assembly 15: 120,809,959-120,852,192 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 2 transcripts (splice variants), 222 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000028116.3	CYP27A1-202	2556	581aa	ENSSSCP00000020985.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LAB7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000017640.5	CYP27A1-201	1758	462aa	ENSSSCP00000017162.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1PCN5 F1SRX1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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