Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATF1 ENSSSCG00000016138

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Description

activating transcription factor 1 [Source:VGNC Symbol;Acc:VGNC:85605]

Location

Primary_assembly 5: 16,618,643-16,681,380 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 2 transcripts (splice variants), 153 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000017571.5	ATF1-202	2740	251aa	ENSSSCP00000017098.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SHC5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000105639.1	ATF1-201	583	55aa	ENSSSCP00000078723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FIL4	-

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Summary

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