Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL5A2 ENSSSCG00000016035

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Description

collagen type V alpha 2 chain [Source:VGNC Symbol;Acc:VGNC:95981]

Location

Primary_assembly 15: 93,611,856-93,800,191 reverse strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 2 transcripts (splice variants), 224 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000043552.2	COL5A2-201	6178	1499aa	ENSSSCP00000055229.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0XNT6 Q59IP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000017460.5	COL5A2-202	6120	1453aa	ENSSSCP00000016990.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0T396 F1RXW0	-

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Summary

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