Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: MMP1 ENSSSCG00000014985

.

Description

matrix metallopeptidase 1 [Source:NCBI gene (formerly Entrezgene);Acc:397320]

Gene Synonyms

Mmp1a

Location

Primary_assembly 9: 33,411,065-33,420,076 reverse strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 1 transcript (splice variant), 352 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000038101.2	MMP1-201	2541	469aa	ENSSSCP00000042817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9VZX3 P21692	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.