Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: STXBP2 ENSSSCG00000013576

.

Description

syntaxin binding protein 2 [Source:VGNC Symbol;Acc:VGNC:93597]

Location

Primary_assembly 2: 71,504,569-71,513,422 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 5 transcripts (splice variants), 207 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000089591.2	STXBP2-201	2144	701aa	ENSSSCP00000060228.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QA44 A0A8D1LLD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000079933.2	STXBP2-205	2023	642aa	ENSSSCP00000071120.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RAG7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000014828.5	STXBP2-203	1938	622aa	ENSSSCP00000014427.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SCI9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000053089.3	STXBP2-202	1904	614aa	ENSSSCP00000053276.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BB33	-
ENSSSCT00000088882.2	STXBP2-204	1719	549aa	ENSSSCP00000074382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RBJ2 A0A8D1H1T3	-

.

Summary

.

.