Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
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Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CTR9 ENSSSCG00000013406

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Description

CTR9 homolog, Paf1/RNA polymerase II complex component [Source:VGNC Symbol;Acc:VGNC:87072]

Location

Primary_assembly 2: 48,700,974-48,729,307 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 4 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000014646.5	CTR9-203	4055	1169aa	ENSSSCP00000014251.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S6V3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000092226.1	CTR9-204	3908	1120aa	ENSSSCP00000080224.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FLK6	-
ENSSSCT00000101057.1	CTR9-202	3808	1157aa	ENSSSCP00000075262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FAD9	-
ENSSSCT00000058352.3	CTR9-201	3268	977aa	ENSSSCP00000058056.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BPF6	-

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Summary

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