Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHST1 ENSSSCG00000013273

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Description

carbohydrate sulfotransferase 1 [Source:VGNC Symbol;Acc:VGNC:86673]

Location

Primary_assembly 2: 16,772,262-16,789,027 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 2 transcripts (splice variants), 220 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000078007.2	CHST1-201	3069	411aa	ENSSSCP00000062861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SF01 F1SHJ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000014497.4	CHST1-202	2784	411aa	ENSSSCP00000014105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SF01 F1SHJ6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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