Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMC4 ENSSSCG00000011731

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Description

structural maintenance of chromosomes 4 [Source:VGNC Symbol;Acc:VGNC:93240]

Location

Primary_assembly 13: 100,078,272-100,117,309 forward strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 7 transcripts (splice variants), 216 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000047832.3	SMC4-203	4320	1288aa	ENSSSCP00000036932.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480E9Z3 A0A4X1VG91	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000075653.2	SMC4-201	4536	1257aa	ENSSSCP00000068492.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R2R4 A0A8D1QAE1	-
ENSSSCT00000047103.2	SMC4-204	4179	1241aa	ENSSSCP00000052092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B7L0 A0A4X1VHA5	-
ENSSSCT00000042025.2	SMC4-205	4167	1237aa	ENSSSCP00000031467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZJ11 A0A4X1VGA2	-
ENSSSCT00000056723.3	SMC4-206	4158	1234aa	ENSSSCP00000033838.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQU7 A0A8D0T0D9	-
ENSSSCT00000048844.2	SMC4-207	4146	1230aa	ENSSSCP00000036028.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZWL6 A0A4X1VCD8	-
ENSSSCT00000012842.5	SMC4-202	4070	1233aa	ENSSSCP00000012502.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0JNZ9 F1SH51	-

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Summary

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