Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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External references
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ID History
- Gene history

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Gene: LSM3 ENSSSCG00000011601

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Description

LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:VGNC Symbol;Acc:VGNC:103978]

Location

Primary_assembly 13: 70,336,907-70,348,651 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 2 transcripts (splice variants) and 251 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000078675.2	LSM3-201	3329	105aa	ENSSSCP00000074370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RNF0 A0A8D1CT52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000012698.5	LSM3-202	3348	102aa	ENSSSCP00000012365.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U9H3 F2Z5S4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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