Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP4 ENSSSCG00000011382

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Description

ubiquitin specific peptidase 4 [Source:VGNC Symbol;Acc:VGNC:94764]

Location

Primary_assembly 13: 31,848,851-31,904,243 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 5 transcripts (splice variants), 132 orthologues and 51 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000039768.3	USP4-204	3934	1023aa	ENSSSCP00000046329.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQJ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000101266.1	USP4-205	3754	910aa	ENSSSCP00000075830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FAH0	-
ENSSSCT00000074066.2	USP4-203	3317	899aa	ENSSSCP00000060223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SV69 A0A5G2QA39	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000012460.5	USP4-202	3243	916aa	ENSSSCP00000012135.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SPT0	-
ENSSSCT00000089022.2	USP4-201	2684	888aa	ENSSSCP00000072683.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R8P1	-

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Summary

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