Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VCL ENSSSCG00000010313

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Description

vinculin [Source:VGNC Symbol;Acc:VGNC:94812]

Location

Primary_assembly 14: 76,700,173-76,811,869 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 5 transcripts (splice variants), 267 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000011289.4	VCL-204	5486	1135aa	ENSSSCP00000010997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P26234-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000011290.4	VCL-203	5426	1115aa	ENSSSCP00000010998.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9F393 A0A4X1SRJ9	-
ENSSSCT00000087228.1	VCL-202	5224	1067aa	ENSSSCP00000065820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P26234-2	-
ENSSSCT00000085091.2	VCL-205	5111	1118aa	ENSSSCP00000074523.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RBX6	-
ENSSSCT00000102609.1	VCL-201	5098	80aa	ENSSSCP00000076282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FAH6	-

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Summary

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