Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CAPN9 ENSSSCG00000010182

.

Description

calpain 9 [Source:VGNC Symbol;Acc:VGNC:86177]

Location

Primary_assembly 14: 59,582,046-59,623,376 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 4 transcripts (splice variants), 208 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000011148.3	CAPN9-203	2356	690aa	ENSSSCP00000010859.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RG55	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000087697.1	CAPN9-204	2278	664aa	ENSSSCP00000069083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QY66	-
ENSSSCT00000060757.2	CAPN9-202	2269	663aa	ENSSSCP00000048619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AXF0	-
ENSSSCT00000086375.1	CAPN9-201	2108	627aa	ENSSSCP00000071866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R452	-

.

Summary

.

.