Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: VPS29 ENSSSCG00000009823

.

Description

VPS29 retromer complex component [Source:VGNC Symbol;Acc:VGNC:94847]

Location

Primary_assembly 14: 31,859,067-31,869,579 reverse strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 3 transcripts (splice variants) and 250 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000010766.4	VPS29-201	2412	190aa	ENSSSCP00000010486.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0J214 F1RNN0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000088424.2	VPS29-203	2576	182aa	ENSSSCP00000064190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U1Z7 A0A5G2QIE0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000063025.2	VPS29-202	1086	187aa	ENSSSCP00000052247.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B6U5 A0A8D2AAZ9	-

.

Summary

.

.