Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL4A2 ENSSSCG00000009545

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Description

collagen type IV alpha 2 chain [Source:VGNC Symbol;Acc:VGNC:86875]

Location

Primary_assembly 11: 76,997,516-77,161,614 forward strand.

Sscrofa11.1:CM000822.5

About this gene

This gene has 4 transcripts (splice variants), 162 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000010463.4	COL4A2-204	6008	1712aa	ENSSSCP00000010191.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0TIH4 F1RLL9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000068823.1	COL4A2-202	5897	1675aa	ENSSSCP00000069497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2REY7 A0A8D1QBR7	-
ENSSSCT00000080902.2	COL4A2-203	5861	1663aa	ENSSSCP00000071789.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RJ53	-
ENSSSCT00000090814.1	COL4A2-201	425	76aa	ENSSSCP00000068547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1U704 A0A5G2R2X1	-

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Summary

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