Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCARB2 ENSSSCG00000008980

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Description

scavenger receptor class B member 2 [Source:VGNC Symbol;Acc:VGNC:92614]

Location

Primary_assembly 8: 71,838,397-71,940,607 reverse strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 7 transcripts (splice variants), 214 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000070141.1	SCARB2-203	1648	480aa	ENSSSCP00000062523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QEC5 A0A8D1HCY1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000068222.2	SCARB2-202	4576	461aa	ENSSSCP00000065874.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QMJ7	-
ENSSSCT00000009835.4	SCARB2-204	4299	478aa	ENSSSCP00000009582.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SYC5 F1RYT3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000074997.1	SCARB2-205	4179	438aa	ENSSSCP00000070142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SY50 A0A5G2R7N0	-
ENSSSCT00000082573.1	SCARB2-206	3870	335aa	ENSSSCP00000067123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SXX6 A0A5G2QYV6	-
ENSSSCT00000089675.1	SCARB2-207	3387	174aa	ENSSSCP00000069328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SW78 A0A5G2QYV5	-
ENSSSCT00000079342.2	SCARB2-201	1371	456aa	ENSSSCP00000060975.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QG17	-

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Summary

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