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- Splice variants
- Transcript comparison
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Gene: NELFA ENSSSCG00000008681

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Description

negative elongation factor complex member A [Source:VGNC Symbol;Acc:VGNC:90680]

Location

Primary_assembly 8: 1,018,453-1,039,134 reverse strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 3 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000056909.3	NELFA-202	2086	542aa	ENSSSCP00000059421.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BTA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000091592.2	NELFA-203	2194	531aa	ENSSSCP00000065132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QT16	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000068853.2	NELFA-201	1885	472aa	ENSSSCP00000073091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2REL7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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