Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: EMILIN1 ENSSSCG00000008557

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Description

elastin microfibril interfacer 1 [Source:VGNC Symbol;Acc:VGNC:87680]

Location

Primary_assembly 3: 112,031,917-112,046,429 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 5 transcripts (splice variants), 257 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000069937.2	EMILIN1-203	4491	1292aa	ENSSSCP00000061396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QCU4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000009362.5	EMILIN1-204	4473	1286aa	ENSSSCP00000009122.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SDQ5	-
ENSSSCT00000067119.2	EMILIN1-205	3774	980aa	ENSSSCP00000062647.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QKQ5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000102547.1	EMILIN1-201	3204	867aa	ENSSSCP00000075439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F7X2	-
ENSSSCT00000046875.3	EMILIN1-202	3155	913aa	ENSSSCP00000055822.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BH14	-

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Summary

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