Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STX1A ENSSSCG00000007772

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Description

syntaxin 1A [Source:VGNC Symbol;Acc:VGNC:93589]

Location

Primary_assembly 3: 10,974,127-10,991,873 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 3 transcripts (splice variants), 201 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000008519.5	STX1A-201	2219	295aa	ENSSSCP00000008300.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RGA3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000073491.2	STX1A-203	2286	287aa	ENSSSCP00000068120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QVH0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000089695.2	STX1A-202	2180	282aa	ENSSSCP00000068641.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QUL3	-

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Summary

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