Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPN1 ENSSSCG00000007469

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Description

protein tyrosine phosphatase non-receptor type 1 [Source:VGNC Symbol;Acc:VGNC:96519]

Location

Primary_assembly 17: 52,017,130-52,086,736 forward strand.

Sscrofa11.1:CM000828.5

About this gene

This gene has 1 transcript (splice variant), 209 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000059943.2	PTPN1-201	4660	424aa	ENSSSCP00000053585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BAQ6 A0A8D0V459	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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