Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OTUD6B ENSSSCG00000006120

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Description

OTU deubiquitinase 6B [Source:VGNC Symbol;Acc:VGNC:91103]

Location

Primary_assembly 4: 45,772,333-45,793,338 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000006712.5	OTUD6B-203	3171	323aa	ENSSSCP00000006530.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1XEF5 F1RXF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000069734.2	OTUD6B-201	3157	191aa	ENSSSCP00000072765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480Q867 A0A4X1UCX8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000077174.1	OTUD6B-202	1515	280aa	ENSSSCP00000071064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R1S1 A0A8D0WD98	-
ENSSSCT00000090390.2	OTUD6B-204	1113	311aa	ENSSSCP00000064136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0V9	-

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Summary

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