Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TNFRSF11A ENSSSCG00000004898

.

Description

TNF receptor superfamily member 11a [Source:VGNC Symbol;Acc:VGNC:94257]

Location

Primary_assembly 1: 159,128,038-159,187,481 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 3 transcripts (splice variants), 487 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000036304.4	TNFRSF11A-203	7109	629aa	ENSSSCP00000029324.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1NQ74 K7GN73	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000067481.1	TNFRSF11A-202	865	263aa	ENSSSCP00000073067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TQS9 A0A5G2R738	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000028414.3	TNFRSF11A-201	862	263aa	ENSSSCP00000024913.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TTN0 I3LLE5	-

.

Summary

.

.