Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COPS2 ENSSSCG00000004652

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Description

COP9 signalosome subunit 2 [Source:VGNC Symbol;Acc:VGNC:86899]

Location

Primary_assembly 1: 122,542,387-122,578,858 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 3 transcripts (splice variants), 237 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000005137.5	COPS2-201	6475	428aa	ENSSSCP00000005012.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5K1ULP5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000067634.2	COPS2-203	6392	393aa	ENSSSCP00000067379.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZPI3 A0A4X1SLP6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000079932.1	COPS2-202	6126	379aa	ENSSSCP00000074256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SN00 A0A5G2RCU4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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