transcription factor 12 [Source:VGNC Symbol;Acc:VGNC:93817]
Primary_assembly 1: 114,682,303-115,056,262 reverse strand.
Sscrofa11.1:CM000812.5
This gene has 6 transcripts (splice variants), 284 orthologues and 2 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000061260.3 | TCF12-204 | 7950 | 692aa | ENSSSCP00000035905.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZWM3 A0A8D0K1U0 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000005081.5 | TCF12-205 | 6061 | 624aa | ENSSSCP00000036234.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZX83 A0A8D1NLR3 | - |
| ENSSSCT00000043785.3 | TCF12-203 | 6059 | 632aa | ENSSSCP00000050607.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B2D5 A0A8D2C369 | - |
| ENSSSCT00000062025.3 | TCF12-202 | 5409 | 446aa | ENSSSCP00000055260.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BGS9 A0A4X1TKM0 | - |
| ENSSSCT00000064267.3 | TCF12-206 | 4838 | 648aa | ENSSSCP00000050955.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B4E0 A0A4X1TKU9 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSSSCT00000034080.3 | TCF12-201 | 4101 | 536aa | ENSSSCP00000051524.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B5G6 A0A4X1TIC0 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
