Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: REPS1 ENSSSCG00000004146

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Description

RALBP1 associated Eps domain containing 1 [Source:VGNC Symbol;Acc:VGNC:92213]

Location

Primary_assembly 1: 25,481,343-25,565,277 forward strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 5 transcripts (splice variants), 226 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000004582.6	REPS1-205	2852	795aa	ENSSSCP00000004479.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1S6Z2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000033622.4	REPS1-202	2684	768aa	ENSSSCP00000030168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7GQJ8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000056258.3	REPS1-203	2588	736aa	ENSSSCP00000033070.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZNN0	-
ENSSSCT00000076175.2	REPS1-204	2492	704aa	ENSSSCP00000066652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QRG8	-
ENSSSCT00000068204.1	REPS1-201	843	220aa	ENSSSCP00000071389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VMA1 A0A5G2R2S0	-

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Summary

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