Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PHACTR2 ENSSSCG00000004132

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Description

phosphatase and actin regulator 2 [Source:VGNC Symbol;Acc:VGNC:91366]

Location

Primary_assembly 1: 21,443,970-21,722,922 reverse strand.

Sscrofa11.1:CM000812.5

About this gene

This gene has 5 transcripts (splice variants), 224 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000048036.3	PHACTR2-203	3951	646aa	ENSSSCP00000033100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A481CKM4 A0A8D2A4T6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000037187.3	PHACTR2-204	3939	635aa	ENSSSCP00000043241.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AH56 A0A8D1RZX6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000041834.3	PHACTR2-205	3784	622aa	ENSSSCP00000053117.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B9F1 A0A8D1CK01	-
ENSSSCT00000004567.5	PHACTR2-202	3529	513aa	ENSSSCP00000004464.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1WN01 F1S716	-
ENSSSCT00000026115.3	PHACTR2-201	1623	540aa	ENSSSCP00000025783.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1ZZR8 I3LNV8	-

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Summary

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