Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FUBP1 ENSSSCG00000003771

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Description

far upstream element binding protein 1 [Source:VGNC Symbol;Acc:VGNC:96781]

Location

Primary_assembly 6: 135,281,521-135,318,714 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 6 transcripts (splice variants), 178 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000004169.4	FUBP1-202	6808	664aa	ENSSSCP00000004075.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1W195 F1S9S9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000054676.1	FUBP1-205	7231	662aa	ENSSSCP00000033566.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZPN8 A0A8D1LAC4	-
ENSSSCT00000054267.2	FUBP1-206	7210	655aa	ENSSSCP00000041158.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ABG1 A0A8D1LI10	-
ENSSSCT00000048540.2	FUBP1-203	6831	663aa	ENSSSCP00000047010.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ASG1 A0A8D0MP65	-
ENSSSCT00000053943.3	FUBP1-201	6612	600aa	ENSSSCP00000040241.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A8D4	-
ENSSSCT00000055676.3	FUBP1-204	6263	637aa	ENSSSCP00000057358.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BMF7	-

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Summary

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