Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
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ID History
- Gene history

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Gene: CLSPN ENSSSCG00000003628

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Description

claspin [Source:VGNC Symbol;Acc:VGNC:86783]

Location

Primary_assembly 6: 91,906,320-91,967,901 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 2 transcripts (splice variants) and 210 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000042351.3	CLSPN-201	6324	1325aa	ENSSSCP00000032585.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZLZ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000004024.5	CLSPN-202	6015	1237aa	ENSSSCP00000003933.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VX73 F1SV65	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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