Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: EYA3 ENSSSCG00000003580

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Description

EYA transcriptional coactivator and phosphatase 3 [Source:VGNC Symbol;Acc:VGNC:87852]

Location

Primary_assembly 6: 85,095,409-85,185,799 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000003975.5	EYA3-204	5819	573aa	ENSSSCP00000003884.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1PI52 F1STN2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000052478.2	EYA3-205	5693	527aa	ENSSSCP00000037504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A0Q3 A0A8D1D4Y9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000024325.4	EYA3-201	5194	416aa	ENSSSCP00000021639.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TWX4 I3LC66	-
ENSSSCT00000082874.1	EYA3-202	3682	516aa	ENSSSCP00000073664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RM99 A0A8D1PLZ2	-
ENSSSCT00000038041.2	EYA3-203	1926	494aa	ENSSSCP00000054096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BC43 A0A8D1PJV0	-

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Summary

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