cadherin 13 [Source:NCBI gene (formerly Entrezgene);Acc:100126163]
Primary_assembly 6: 4,808,255-5,832,415 reverse strand.
Sscrofa11.1:CM000817.5
This gene has 6 transcripts (splice variants), 204 orthologues and 32 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000075565.2 | CDH13-202 | 3593 | 674aa | ENSSSCP00000061692.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1T2W2 A0A5G2QB64 | - |
| ENSSSCT00000002977.5 | CDH13-201 | 3592 | 713aa | ENSSSCP00000002898.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1T328 A8D737 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| ENSSSCT00000084036.2 | CDH13-205 | 2779 | 747aa | ENSSSCP00000060682.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QF74 A0A8D1CU19 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000079769.2 | CDH13-203 | 2316 | 771aa | ENSSSCP00000060063.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2Q9R1 A0A8D0USM9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000088987.2 | CDH13-206 | 1950 | 649aa | ENSSSCP00000061878.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QBL3 A0A8D1CF26 | - |
| ENSSSCT00000080811.2 | CDH13-204 | 570 | 189aa | ENSSSCP00000060262.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QPP8 | - |
