Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SEL1L ENSSSCG00000002414

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Description

SEL1L adaptor subunit of ERAD E3 ubiquitin ligase [Source:VGNC Symbol;Acc:VGNC:92687]

Location

Primary_assembly 7: 104,219,411-104,283,195 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 5 transcripts (splice variants), 216 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000049435.3	SEL1L-205	6550	794aa	ENSSSCP00000038539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A3J4 A0A4X1SYF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000002683.5	SEL1L-204	6424	784aa	ENSSSCP00000002616.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1RAD6 F1SDZ8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000089522.2	SEL1L-202	6292	740aa	ENSSSCP00000073128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RLF0 A0A8D1EV28	-
ENSSSCT00000092548.1	SEL1L-203	6286	738aa	ENSSSCP00000079426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FJM9	-
ENSSSCT00000085937.2	SEL1L-201	1024	302aa	ENSSSCP00000061952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QE71 A0A8D0X5D8	-

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Summary

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