Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TAPBP ENSSSCG00000001507

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Description

TAP binding protein [Source:HGNC Symbol;Acc:HGNC:11566]

Location

Primary_assembly 7: 29,663,495-29,673,634 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 4 transcripts (splice variants), 206 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000001680.3	TAPBP-204	1857	506aa	ENSSSCP00000001636.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1NLX3 F1RZT0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000053102.3	TAPBP-202	3321	502aa	ENSSSCP00000037938.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A1Y1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000070680.2	TAPBP-203	3241	415aa	ENSSSCP00000072252.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R585	-
ENSSSCT00000067132.2	TAPBP-201	1588	450aa	ENSSSCP00000070782.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R356 A0A8D1G9D0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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