Primary_assembly 7: 24,993,912-25,001,567 forward strand.
Sscrofa11.1:CM000818.5
This gene has 5 transcripts (splice variants), 111 orthologues and 14 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000033587.4 | - | 801 | 266aa | ENSSSCP00000056508.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8X9AEU9 | - |
| ENSSSCT00000052939.3 | - | 765 | 252aa | ENSSSCP00000054687.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BDT4 | APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| ENSSSCT00000049411.3 | - | 751 | 248aa | ENSSSCP00000046662.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287ARX3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000033999.3 | - | 742 | 245aa | ENSSSCP00000040841.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AAB9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000061470.2 | - | 678 | 225aa | ENSSSCP00000058089.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BNK2 | - |
