Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Gene: GPLD1 ENSSSCG00000001089

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Description

glycosylphosphatidylinositol specific phospholipase D1 [Source:VGNC Symbol;Acc:VGNC:88590]

Location

Primary_assembly 7: 19,291,174-19,346,619 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 4 transcripts (splice variants) and 126 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000001185.5	GPLD1-202	4848	906aa	ENSSSCP00000001160.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1RPE0 F1RUE4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000053373.3	GPLD1-201	4878	838aa	ENSSSCP00000043498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AHX3 A0A8D1H5D5	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000049295.3	GPLD1-203	4716	862aa	ENSSSCP00000051783.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B650 A0A8D1RLI8	-
ENSSSCT00000096680.1	GPLD1-204	4701	857aa	ENSSSCP00000076134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FCV0	-

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Summary

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