Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ABCC9 ENSSSCG00000000571

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Description

ATP binding cassette subfamily C member 9 [Source:VGNC Symbol;Acc:VGNC:84960]

Location

Primary_assembly 5: 51,536,526-51,691,595 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 5 transcripts (splice variants), 232 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000000614.4	ABCC9-203	7344	1549aa	ENSSSCP00000000600.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VF22 F1SR11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSSSCT00000056800.3	ABCC9-205	6330	1549aa	ENSSSCP00000055442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480JBJ3 A0A4X1VEZ1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000059132.3	ABCC9-204	4731	1513aa	ENSSSCP00000041578.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AC87	-
ENSSSCT00000087424.2	ABCC9-201	726	171aa	ENSSSCP00000073189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VHS1 A0A5G2RA47	-
ENSSSCT00000055869.3	ABCC9-202	663	149aa	ENSSSCP00000031623.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZJC0 A0A4X1VG23	-

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Summary

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