protein tyrosine phosphatase receptor type B [Source:VGNC Symbol;Acc:VGNC:91984]
Primary_assembly 5: 34,659,964-34,794,289 reverse strand.
Sscrofa11.1:CM000816.5
This gene has 5 transcripts (splice variants), 264 orthologues and 37 paralogues.
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protein tyrosine phosphatase receptor type B [Source:VGNC Symbol;Acc:VGNC:91984]
Primary_assembly 5: 34,659,964-34,794,289 reverse strand.
Sscrofa11.1:CM000816.5
This gene has 5 transcripts (splice variants), 264 orthologues and 37 paralogues.
Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
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ENSSSCT00000044060.2 | PTPRB-204 | 8661 | 2213aa | ENSSSCP00000058445.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BPL0 A0A8D1GY96 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
ENSSSCT00000055823.2 | PTPRB-205 | 8397 | 2125aa | ENSSSCP00000040609.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A9P8 A0A8D1H185 | - |
ENSSSCT00000000543.5 | PTPRB-201 | 8224 | 1997aa | ENSSSCP00000000535.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1VW45 F1SH38 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
ENSSSCT00000096413.1 | PTPRB-202 | 7954 | 1907aa | ENSSSCP00000079487.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1VW57 A0A8W4FKQ3 | - |
ENSSSCT00000092393.1 | PTPRB-203 | 7954 | 1907aa | ENSSSCP00000078326.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1W380 A0A8W4FHH5 | - |
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Ensembl release 111 - January 2024 ©
EMBL-EBI
EMBL-EBI
http://useast.ensembl.org
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