Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARHGEF25 ENSSSCG00000000435

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Description

Rho guanine nucleotide exchange factor 25 [Source:VGNC Symbol;Acc:VGNC:103216]

Location

Primary_assembly 5: 22,873,736-22,880,827 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 3 transcripts (splice variants), 191 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000038624.3	ARHGEF25-203	2319	622aa	ENSSSCP00000049410.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W4U4 F1SKH7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000000476.5	ARHGEF25-202	2150	590aa	ENSSSCP00000000469.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W012 F1SKH1	-
ENSSSCT00000057246.3	ARHGEF25-201	2101	580aa	ENSSSCP00000054690.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BEY8 A0A4X1W5S2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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