Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TAB1 ENSSSCG00000000087

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Description

TGF-beta activated kinase 1 (MAP3K7) binding protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:100153785]

Location

Primary_assembly 5: 8,826,840-8,852,776 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 6 transcripts (splice variants), 201 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000035948.4	TAB1-201	2708	604aa	ENSSSCP00000028647.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7GLB8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000087726.2	TAB1-204	2493	480aa	ENSSSCP00000066093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QVY8	-
ENSSSCT00000000093.4	TAB1-205	2464	504aa	ENSSSCP00000000091.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SNY4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000083883.2	TAB1-202	2408	504aa	ENSSSCP00000066908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R8H0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000097715.1	TAB1-203	2342	482aa	ENSSSCP00000077744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FEQ9	-
ENSSSCT00000076376.2	TAB1-206	1451	465aa	ENSSSCP00000067811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0S4	-

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Summary

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