Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: XRCC6 ENSSSCG00000000059

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Description

X-ray repair cross complementing 6 [Source:VGNC Symbol;Acc:VGNC:95011]

Location

Primary_assembly 5: 6,903,495-6,929,052 reverse strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 6 transcripts (splice variants), 266 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000070289.1	XRCC6-205	2509	606aa	ENSSSCP00000069505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R5T4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000095358.1	XRCC6-204	2234	605aa	ENSSSCP00000076154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FCX0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000102712.1	XRCC6-206	2137	556aa	ENSSSCP00000076768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FD40	-
ENSSSCT00000046450.3	XRCC6-202	1990	590aa	ENSSSCP00000056706.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BJK2	-
ENSSSCT00000000065.5	XRCC6-203	1990	590aa	ENSSSCP00000000065.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1R5B1 F1SRE0	-
ENSSSCT00000083276.2	XRCC6-201	1876	552aa	ENSSSCP00000065901.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QPA7	-

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Summary

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