Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: lig1 ENSSSAG00000081183

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Description

ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]

Location

Primary_assembly 14: 42,728,579-42,751,232 forward strand.

Ssal_v3.1:HG993273.1

About this gene

This gene has 6 transcripts (splice variants), 189 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSAT00000155005.2	lig1-201	4143	1088aa	ENSSSAP00000119683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1S3M043	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSAT00000248920.1	lig1-202	4098	1073aa	ENSSSAP00000154905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000155019.2	lig1-203	3679	1058aa	ENSSSAP00000119697.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000155012.2	lig1-204	3488	1019aa	ENSSSAP00000119690.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000155021.2	lig1-205	3313	997aa	ENSSSAP00000119699.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSSSAT00000155015.2	lig1-206	3298	992aa	ENSSSAP00000119693.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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