Transcript: ENSRNOT00000108016.1 Vti1a-203

Description

vesicle transport through interaction with t-SNAREs 1A [Source:RGD Symbol;Acc:621490]

Gene Synonyms

DD6A4-2(1), Vti1, Vti1-pending

Location

About this transcript

This transcript has 8 exons, is annotated with 16 domains and features, is associated with 487 variant alleles and maps to 175 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000108016.1	Vti1a-203	2648	217aa	ENSRNOP00000083070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JI51	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000067460.5	Vti1a-202	888	212aa	ENSRNOP00000058953.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LT41	-
ENSRNOT00000066236.4	Vti1a-201	730	197aa	ENSRNOP00000061050.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M938	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,648 bps, Translation length: 217 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9JI51

Version

ENSRNOT00000108016.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.