Transcript: ENSRNOT00000100115.1 RT1-M1-4-202

Description

RT1 class I, locus M1, gene 4 [Source:RGD Symbol;Acc:1359375]

Gene Synonyms

H2-M11

Location

About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 53 variant alleles and maps to 77 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000100115.1	RT1-M1-4-202	2771	338aa	ENSRNOP00000093320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AK64	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000038626.4	RT1-M1-4-201	2675	335aa	ENSRNOP00000092191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GK27	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,771 bps, Translation length: 338 residues

Version

ENSRNOT00000100115.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.