Transcript: ENSRNOT00000090230.2 Tagln3-202

Description

transgelin 3 [Source:RGD Symbol;Acc:69301]

Gene Synonyms

LOC103693564, Np22, Np25

Location

About this transcript

This transcript has 5 exons, is annotated with 25 domains and features, is associated with 58 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000002942.8	Tagln3-201	1562	202aa	ENSRNOP00000002942.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UHL4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000090230.2	Tagln3-202	1229	199aa	ENSRNOP00000072985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P37805	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,229 bps, Translation length: 199 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P37805

Version

ENSRNOT00000090230.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.