Transcript: ENSRNOT00000089359.2 Arhgef17-201

Description

Rho guanine nucleotide exchange factor 17 [Source:RGD Symbol;Acc:1309890]

Gene Synonyms

LOC308862, NEWGENE_1309890

Location

About this transcript

This transcript has 21 exons, is annotated with 61 domains and features, is associated with 211 variant alleles and maps to 317 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000089359.2	Arhgef17-201	8050	2057aa	ENSRNOP00000070400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXT9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000102090.1	Arhgef17-202	4421	1047aa	ENSRNOP00000080893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRV8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 8,050 bps, Translation length: 2,057 residues

Version

ENSRNOT00000089359.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.