Transcript: ENSRNOT00000085770.2 Sag-202

Description

S-antigen visual arrestin [Source:RGD Symbol;Acc:3619]

Gene Synonyms

S-AG, SAGMR

Location

About this transcript

This transcript has 16 exons, is annotated with 18 domains and features, is associated with 124 variant alleles and maps to 190 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000024733.7	Sag-201	1483	403aa	ENSRNOP00000024733.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GNK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000085770.2	Sag-202	1349	403aa	ENSRNOP00000071579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P15887	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 1,349 bps, Translation length: 403 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P15887

Version

ENSRNOT00000085770.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.