Transcript: ENSRNOT00000078077.3 Galnt11-202

Description

polypeptide N-acetylgalactosaminyltransferase 11 [Source:RGD Symbol;Acc:735097]

Location

About this transcript

This transcript has 12 exons, is annotated with 14 domains and features, is associated with 92 variant alleles and maps to 187 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000011814.8	Galnt11-201	2667	609aa	ENSRNOP00000011815.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHG8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000078077.3	Galnt11-202	2518	605aa	ENSRNOP00000074237.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K7K0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,518 bps, Translation length: 605 residues

Version

ENSRNOT00000078077.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.