Transcript: ENSRNOT00000072653.3 LOC100910497-202

Description

paired immunoglobulin-like type 2 receptor alpha-like [Source:RGD Symbol;Acc:6498401]

Gene Synonyms

LOC100910669, LOC288568, RGD1562847

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 70 variant alleles and maps to 160 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000039797.7	LOC100910497-201	1231	291aa	ENSRNOP00000035136.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M5V8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000072653.3	LOC100910497-202	1090	279aa	ENSRNOP00000064412.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0R4W2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,090 bps, Translation length: 279 residues

Version

ENSRNOT00000072653.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.