Transcript: ENSRNOT00000065419.3 Foxj2-201

Description

forkhead box J2 [Source:RGD Symbol;Acc:1565101]

Gene Synonyms

LOC502886, RGD1565101

Location

About this transcript

This transcript has 11 exons, is annotated with 28 domains and features, is associated with 80 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000087883.2	Foxj2-202	5545	623aa	ENSRNOP00000069705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JW18	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000065419.3	Foxj2-201	4979	583aa	ENSRNOP00000062121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3Z992	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 4,979 bps, Translation length: 583 residues

Version

ENSRNOT00000065419.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.