Transcript: ENSRNOT00000049441.4 Spesp1-201

Description

sperm equatorial segment protein 1 [Source:RGD Symbol;Acc:1563468]

Gene Synonyms

LOC501010, MGC156770, RGD1563468

Location

About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 53 variant alleles and maps to 89 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000049441.4	Spesp1-201	1556	409aa	ENSRNOP00000043936.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0JPP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000116693.1	Spesp1-202	1669	406aa	ENSRNOP00000086706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6I5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,556 bps, Translation length: 409 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0JPP4

Version

ENSRNOT00000049441.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.