Transcript: ENSRNOT00000049269.4 Scart1-201

Description

scavenger receptor family member expressed on T-cells 1 [Source:RGD Symbol;Acc:1307378]

Gene Synonyms

Cd163l1, LOC293591, RGD1307378

Location

About this transcript

This transcript has 13 exons, is annotated with 53 domains and features, is associated with 138 variant alleles and maps to 124 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000054880.6	Scart1-202	3297	997aa	ENSRNOP00000051764.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZR76	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000049269.4	Scart1-201	3291	995aa	ENSRNOP00000045146.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4AEN2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,291 bps, Translation length: 995 residues

Version

ENSRNOT00000049269.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.