Transcript: ENSRNOT00000048418.5 Ubtf-201

Description

upstream binding transcription factor [Source:RGD Symbol;Acc:3927]

Gene Synonyms

LOC679205, Tcfubf, UBF-1

Location

About this transcript

This transcript has 20 exons, is annotated with 46 domains and features, is associated with 69 variant alleles and maps to 330 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000064283.4	Ubtf-202	4736	764aa	ENSRNOP00000063740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P25977-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000048418.5	Ubtf-201	4625	727aa	ENSRNOP00000044305.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P25977-2	-
ENSRNOT00000105635.1	Ubtf-203	725	168aa	ENSRNOP00000085418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1L0	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,625 bps, Translation length: 727 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P25977

Version

ENSRNOT00000048418.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.